Corrigendum to "Transcriptomic Changes in Soybean Underlying Growth Promotion and Defense Against Cyst Nematode After Bacillus simplex Sneb545 Treatment" [Gene 898 (2024) 148080]
Gene. 2024 Mar 25;914:148395. doi: 10.1016/j.gene.2024.148395. Online ahead of print.NO ABSTRACTPMID:38531176 | DOI:10.1016/j.gene.2024.148395 (Source: Gene)
Source: Gene - March 26, 2024 Category: Genetics & Stem Cells Authors: Wenshu Kang Yuxi Duan Piao Lei Source Type: research

Transcriptomic regulatory analysis of skeletal muscle development in landrace pigs
This study analyzed the whole-transcriptome data of skeletal muscles at 27 developmental nodes (E33-D180) in Landrace pigs, and their key regulatory factors in the development process were identified using the bioinformatics method. Firstly, we constructed a transcriptome expression map of skeletal muscle development from embryo to adulthood in Landrace pig. Subsequently, due to drastic change in gene expression, the perinatal periods including E105, D0 and D9, were focused, and the genes related to the process of muscle fiber remodeling and volume expansion were revealed. Then, though conjoint analysis with miRNA and lncR...
Source: Gene - March 26, 2024 Category: Genetics & Stem Cells Authors: Mubin Yu Yanqin Feng Jiamao Yan Xiaoyuan Zhang Zhe Tian Tao Wang Junjie Wang Wei Shen Source Type: research

Analysis of differentially expressed lncRNAs and mRNAs associated with slow ‑transit constipation
This study analyzes the expression profiles of lncRNAs and mRNAs associated with STC. Our findings will contribute to further understanding of the molecular mechanism of STC and provide potential diagnostic or therapeutic biomarkers for STC.PMID:38527672 | DOI:10.1016/j.gene.2024.148400 (Source: Gene)
Source: Gene - March 25, 2024 Category: Genetics & Stem Cells Authors: Yuanxin Miao Xiongwei Xie Yonglian Zhang Xu Ma Xiaoxuan Zhu Rong Li Jinhua Bi Rui Duan Xu Ai Source Type: research

Genetic association of novel SNPs in HK-1 (rs201626997) and HK-3 (rs143604141) with type 2 diabetes mellitus in Bangladeshi population
CONCLUSION: This study will help us to easily detect the polymorphisms of HK-1 (rs201626997) and HK-3 (rs143604141) in different populations of the world. Further studies with a greater number of participants and more physiological information are required to better understand the underlying genetic causes of T2DM susceptibility in Bangladesh.PMID:38527673 | DOI:10.1016/j.gene.2024.148409 (Source: Gene)
Source: Gene - March 25, 2024 Category: Genetics & Stem Cells Authors: Md Tarikul Islam Md Abdullah Al Mamun Khan Shahidur Rahman K M Kaderi Kibria Source Type: research

Identification and preliminary validation of differently expressed genes as candidate biomarkers associated with atherosclerosis
CONCLUSION: The identified candidate genes TNF, CXCL8, CCL4, IL1B, CCL3 and CCR8 may have the potential to serve as prognostic biomarker in diagnosing AS.PMID:38527674 | DOI:10.1016/j.gene.2024.148410 (Source: Gene)
Source: Gene - March 25, 2024 Category: Genetics & Stem Cells Authors: Liqin Zhou Liping Zhou Qiliang Chen Congying Chen Yuanyuan Qian Dayong Lou Huanjie Ma Suying Wang Source Type: research

Analysis of differentially expressed lncRNAs and mRNAs associated with slow ‑transit constipation
This study analyzes the expression profiles of lncRNAs and mRNAs associated with STC. Our findings will contribute to further understanding of the molecular mechanism of STC and provide potential diagnostic or therapeutic biomarkers for STC.PMID:38527672 | DOI:10.1016/j.gene.2024.148400 (Source: Gene)
Source: Gene - March 25, 2024 Category: Genetics & Stem Cells Authors: Yuanxin Miao Xiongwei Xie Yonglian Zhang Xu Ma Xiaoxuan Zhu Rong Li Jinhua Bi Rui Duan Xu Ai Source Type: research

Genetic association of novel SNPs in HK-1 (rs201626997) and HK-3 (rs143604141) with type 2 diabetes mellitus in Bangladeshi population
CONCLUSION: This study will help us to easily detect the polymorphisms of HK-1 (rs201626997) and HK-3 (rs143604141) in different populations of the world. Further studies with a greater number of participants and more physiological information are required to better understand the underlying genetic causes of T2DM susceptibility in Bangladesh.PMID:38527673 | DOI:10.1016/j.gene.2024.148409 (Source: Gene)
Source: Gene - March 25, 2024 Category: Genetics & Stem Cells Authors: Md Tarikul Islam Md Abdullah Al Mamun Khan Shahidur Rahman K M Kaderi Kibria Source Type: research

Identification and preliminary validation of differently expressed genes as candidate biomarkers associated with atherosclerosis
CONCLUSION: The identified candidate genes TNF, CXCL8, CCL4, IL1B, CCL3 and CCR8 may have the potential to serve as prognostic biomarker in diagnosing AS.PMID:38527674 | DOI:10.1016/j.gene.2024.148410 (Source: Gene)
Source: Gene - March 25, 2024 Category: Genetics & Stem Cells Authors: Liqin Zhou Liping Zhou Qiliang Chen Congying Chen Yuanyuan Qian Dayong Lou Huanjie Ma Suying Wang Source Type: research

Effect of bromodomain PHD-finger transcription factor (BPTF) on trophoblast epithelial-to-mesenchymal transition
In conclusion, BPTF participates in the regulation of trophoblast EMT by activating Slug expression, suggesting that BPTF defects are an important factor in RM pathogenesis.PMID:38521110 | DOI:10.1016/j.gene.2024.148405 (Source: Gene)
Source: Gene - March 23, 2024 Category: Genetics & Stem Cells Authors: Linqing Pan Fuquan Zhu Aochen Yu Chao Jia Huaiyun Tang Minglian Zhou Mingrui Li Shiwen Jiang Juan Li Yugui Cui Lisha Tang Source Type: research

S100A6 mediated epithelial-mesenchymal transition affects chemosensitivity of colorectal cancer to oxaliplatin
CONCLUSION: In conclusion, the knockdown of S100A6 may overcome the L-OHP resistance of CRC cells by modulating EMT.PMID:38521111 | DOI:10.1016/j.gene.2024.148406 (Source: Gene)
Source: Gene - March 23, 2024 Category: Genetics & Stem Cells Authors: Chunying Zhang Menglu Zeng Yihan Xu Bihan Huang Pengchong Shi Xianjin Zhu Yingping Cao Source Type: research

Identify CTBP1-DT as an immunological biomarker that promotes lipid synthesis and apoptosis resistance in KIRC
In conclusion, we identified CTBP1-DT as a potential immunological biomarker and discovered the potential role of CTBP1-DT in regulating lipid synthesis and apoptosis resistance.PMID:38521112 | DOI:10.1016/j.gene.2024.148403 (Source: Gene)
Source: Gene - March 23, 2024 Category: Genetics & Stem Cells Authors: Haolin Li Mintian Fei Yi Zhang Qili Xu Rui Feng Jing Cao Yan Qu Haibing Xiao Source Type: research

Comprehensive identification and analysis of DUF640 genes associated with rice growth
In this study, 61 DUF640 genes were identified in the Oryza genus. The expression of DUF640s is induced by multiple hormonal stressors including abscisic acid (ABA), cytokinin (CK), ethylene (ETH), and indole-3-acetic acid (IAA). Specifically, OiDUF640-10 expression significantly increased after ETH treatment. Transgenic experiments showed that overexpressing OiDUF640-10 lines were sensitive to ETH, and seedling length was obstructed. Evolutionary analysis revealed differentiation of the OiDUF640-10 gene in O. sativa ssp. indica and japonica varieties, likely driven by natural selection during the domestication of cultivat...
Source: Gene - March 23, 2024 Category: Genetics & Stem Cells Authors: Zhikai Wang Ruihua Wang Huanran Yuan Fengfeng Fan Shaoqing Li Mingxing Cheng Zhihong Tian Source Type: research

Effect of bromodomain PHD-finger transcription factor (BPTF) on trophoblast epithelial-to-mesenchymal transition
In conclusion, BPTF participates in the regulation of trophoblast EMT by activating Slug expression, suggesting that BPTF defects are an important factor in RM pathogenesis.PMID:38521110 | DOI:10.1016/j.gene.2024.148405 (Source: Gene)
Source: Gene - March 23, 2024 Category: Genetics & Stem Cells Authors: Linqing Pan Fuquan Zhu Aochen Yu Chao Jia Huaiyun Tang Minglian Zhou Mingrui Li Shiwen Jiang Juan Li Yugui Cui Lisha Tang Source Type: research

S100A6 mediated epithelial-mesenchymal transition affects chemosensitivity of colorectal cancer to oxaliplatin
CONCLUSION: In conclusion, the knockdown of S100A6 may overcome the L-OHP resistance of CRC cells by modulating EMT.PMID:38521111 | DOI:10.1016/j.gene.2024.148406 (Source: Gene)
Source: Gene - March 23, 2024 Category: Genetics & Stem Cells Authors: Chunying Zhang Menglu Zeng Yihan Xu Bihan Huang Pengchong Shi Xianjin Zhu Yingping Cao Source Type: research

Identify CTBP1-DT as an immunological biomarker that promotes lipid synthesis and apoptosis resistance in KIRC
In conclusion, we identified CTBP1-DT as a potential immunological biomarker and discovered the potential role of CTBP1-DT in regulating lipid synthesis and apoptosis resistance.PMID:38521112 | DOI:10.1016/j.gene.2024.148403 (Source: Gene)
Source: Gene - March 23, 2024 Category: Genetics & Stem Cells Authors: Haolin Li Mintian Fei Yi Zhang Qili Xu Rui Feng Jing Cao Yan Qu Haibing Xiao Source Type: research